[HUDI-3782] Fixing table config when any of the index is disabled (#5222)

hudi-client/hudi-flink-client/src/main/java/org/apache/hudi/table/HoodieFlinkTable.java

@@ -105,6 +105,9 @@ public abstract class HoodieFlinkTable<T extends HoodieRecordPayload>
   public <T extends SpecificRecordBase> Option<HoodieTableMetadataWriter> getMetadataWriter(String triggeringInstantTimestamp,
                                                                                             Option<T> actionMetadata) {
     if (config.isMetadataTableEnabled()) {
+      // even with metadata enabled, some index could have been disabled
+      // delete metadata partitions corresponding to such indexes
+      deleteMetadataIndexIfNecessary();
       return Option.of(FlinkHoodieBackedTableMetadataWriter.create(context.getHadoopConf().get(), config,
           context, actionMetadata, Option.of(triggeringInstantTimestamp)));
     } else {